Coreelec no longer boots on powerup since root

Hi all.
So i run coreelec on a SD card with a x96 air.
I have been playing around with android custom roms and rooted my current rom using magisk. Since then i cant boot to coreelec unless i do the toothpick method which works fine, until i either reboot or power off the box. Once it reboots it then boots to android not coreelec as it used to.
Any ideas as to why and how to fix?

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